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Cluster: HRGMv2_1470_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1470_21 HRGMv2_1470_21_23 23076 24434 - 2.A.33.1.1
pfam HRGMv2_1470_21 HRGMv2_1470_21_24 24703 25626 - DHH | DHHA2
pfam HRGMv2_1470_21 HRGMv2_1470_21_25 25794 26747 - ROK
TC HRGMv2_1470_21 HRGMv2_1470_21_26 26988 27320 - 4.A.3.2.3
TC HRGMv2_1470_21 HRGMv2_1470_21_27 27330 27632 - 4.A.3.2.9
TC HRGMv2_1470_21 HRGMv2_1470_21_28 27785 29137 - 4.A.3.2.9
CAZyme HRGMv2_1470_21 HRGMv2_1470_21_29 29258 30658 - GH1
Gene ID: HRGMv2_1470_21_23
Type: TC
Location: 23076 - 24434 (-)
Gene ID: HRGMv2_1470_21_24
Type: pfam
Location: 24703 - 25626 (-)
Gene ID: HRGMv2_1470_21_25
Type: pfam
Location: 25794 - 26747 (-)
Gene ID: HRGMv2_1470_21_26
Type: TC
Location: 26988 - 27320 (-)
Gene ID: HRGMv2_1470_21_27
Type: TC
Location: 27330 - 27632 (-)
Gene ID: HRGMv2_1470_21_28
Type: TC
Location: 27785 - 29137 (-)
Gene ID: HRGMv2_1470_21_29
Type: CAZyme
Location: 29258 - 30658 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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