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Cluster: HRGMv2_1470_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1470_17 HRGMv2_1470_17_99 115519 116226 + 1.C.82.1.1
pfam HRGMv2_1470_17 HRGMv2_1470_17_100 116352 117062 - Metallophos | Metallophos_2
pfam HRGMv2_1470_17 HRGMv2_1470_17_101 117059 118975 - Bmp
TC HRGMv2_1470_17 HRGMv2_1470_17_102 119069 119836 - 1.A.23.4.10
TC HRGMv2_1470_17 HRGMv2_1470_17_103 120029 120823 - 3.A.1.34.1
TC HRGMv2_1470_17 HRGMv2_1470_17_104 120816 121739 - 3.A.1.34.1
TC HRGMv2_1470_17 HRGMv2_1470_17_105 121944 122924 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1470_17 HRGMv2_1470_17_106 123085 123867 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1470_17 HRGMv2_1470_17_107 124127 125530 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1470_17 HRGMv2_1470_17_108 125712 126275 - 4.A.1.2.6
peptidase HRGMv2_1470_17 HRGMv2_1470_17_109 126519 127421 + S09.UPW
TC HRGMv2_1470_17 HRGMv2_1470_17_110 127606 129966 + 9.A.8.1.6
TC HRGMv2_1470_17 HRGMv2_1470_17_111 130088 131284 + 2.A.1.2.18
CAZyme HRGMv2_1470_17 HRGMv2_1470_17_112 131438 132814 + GH13_20
Gene ID: HRGMv2_1470_17_99
Type: TC
Location: 115519 - 116226 (+)
Gene ID: HRGMv2_1470_17_100
Type: pfam
Location: 116352 - 117062 (-)
Gene ID: HRGMv2_1470_17_101
Type: pfam
Location: 117059 - 118975 (-)
Gene ID: HRGMv2_1470_17_102
Type: TC
Location: 119069 - 119836 (-)
Gene ID: HRGMv2_1470_17_103
Type: TC
Location: 120029 - 120823 (-)
Gene ID: HRGMv2_1470_17_104
Type: TC
Location: 120816 - 121739 (-)
Gene ID: HRGMv2_1470_17_105
Type: TC
Location: 121944 - 122924 (-)
Gene ID: HRGMv2_1470_17_106
Type:
Location: 123085 - 123867 (-)
Gene ID: HRGMv2_1470_17_107
Type: pfam
Location: 124127 - 125530 (-)
Gene ID: HRGMv2_1470_17_108
Type: TC
Location: 125712 - 126275 (-)
Gene ID: HRGMv2_1470_17_109
Type: peptidase
Location: 126519 - 127421 (+)
Gene ID: HRGMv2_1470_17_110
Type: TC
Location: 127606 - 129966 (+)
Gene ID: HRGMv2_1470_17_111
Type: TC
Location: 130088 - 131284 (+)
Gene ID: HRGMv2_1470_17_112
Type: CAZyme
Location: 131438 - 132814 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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