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Cluster: HRGMv2_1470_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1470_32 HRGMv2_1470_32_121 134555 135481 - CE7
TC HRGMv2_1470_32 HRGMv2_1470_32_122 135613 136440 - 3.A.1.5.27
TC HRGMv2_1470_32 HRGMv2_1470_32_123 136441 138456 - 3.A.1.5.25
TC HRGMv2_1470_32 HRGMv2_1470_32_124 138460 139416 - 3.A.1.5.38
TC HRGMv2_1470_32 HRGMv2_1470_32_125 139574 141187 - 3.A.1.5.27
pfam HRGMv2_1470_32 HRGMv2_1470_32_126 141552 143492 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1470_32 HRGMv2_1470_32_127 143499 145181 - 2.A.66.4.4
Gene ID: HRGMv2_1470_32_121
Type: CAZyme
Location: 134555 - 135481 (-)
Gene ID: HRGMv2_1470_32_122
Type: TC
Location: 135613 - 136440 (-)
Gene ID: HRGMv2_1470_32_123
Type: TC
Location: 136441 - 138456 (-)
Gene ID: HRGMv2_1470_32_124
Type: TC
Location: 138460 - 139416 (-)
Gene ID: HRGMv2_1470_32_125
Type: TC
Location: 139574 - 141187 (-)
Gene ID: HRGMv2_1470_32_126
Type: pfam
Location: 141552 - 143492 (-)
Gene ID: HRGMv2_1470_32_127
Type: TC
Location: 143499 - 145181 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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