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Cluster: HRGMv2_1470_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1470_32 HRGMv2_1470_32_102 110693 112426 - GH13_30
STP HRGMv2_1470_32 HRGMv2_1470_32_103 113358 114104 - STAS
STP HRGMv2_1470_32 HRGMv2_1470_32_104 114186 116531 - GAF | SpoIIE
TC HRGMv2_1470_32 HRGMv2_1470_32_105 117280 118308 - 3.A.1.5.36
TC HRGMv2_1470_32 HRGMv2_1470_32_106 118309 119400 - 3.A.1.5.34
TC HRGMv2_1470_32 HRGMv2_1470_32_107 119403 120338 - 3.A.1.5.11
TC HRGMv2_1470_32 HRGMv2_1470_32_108 120353 121390 - 3.A.1.5.37
TC HRGMv2_1470_32 HRGMv2_1470_32_109 121547 123223 - 3.A.1.5.35
Gene ID: HRGMv2_1470_32_102
Type: CAZyme
Location: 110693 - 112426 (-)
Gene ID: HRGMv2_1470_32_103
Type: STP
Location: 113358 - 114104 (-)
Gene ID: HRGMv2_1470_32_104
Type: STP
Location: 114186 - 116531 (-)
Gene ID: HRGMv2_1470_32_105
Type: TC
Location: 117280 - 118308 (-)
Gene ID: HRGMv2_1470_32_106
Type: TC
Location: 118309 - 119400 (-)
Gene ID: HRGMv2_1470_32_107
Type: TC
Location: 119403 - 120338 (-)
Gene ID: HRGMv2_1470_32_108
Type: TC
Location: 120353 - 121390 (-)
Gene ID: HRGMv2_1470_32_109
Type: TC
Location: 121547 - 123223 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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