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Cluster: HRGMv2_1470_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1470_31 HRGMv2_1470_31_146 186360 187742 - GH4
TC HRGMv2_1470_31 HRGMv2_1470_31_147 187746 189362 - 4.A.1.1.3
pfam HRGMv2_1470_31 HRGMv2_1470_31_148 189462 190316 - PRD | PRD | CAT_RBD
TC HRGMv2_1470_31 HRGMv2_1470_31_149 190335 190847 - 4.A.1.2.5
TC HRGMv2_1470_31 HRGMv2_1470_31_150 191299 193542 - 1.I.1.1.3
TC HRGMv2_1470_31 HRGMv2_1470_31_151 194103 196448 + 3.A.3.5.15
Gene ID: HRGMv2_1470_31_146
Type: CAZyme
Location: 186360 - 187742 (-)
Gene ID: HRGMv2_1470_31_147
Type: TC
Location: 187746 - 189362 (-)
Gene ID: HRGMv2_1470_31_148
Type: pfam
Location: 189462 - 190316 (-)
Gene ID: HRGMv2_1470_31_149
Type: TC
Location: 190335 - 190847 (-)
Gene ID: HRGMv2_1470_31_150
Type: TC
Location: 191299 - 193542 (-)
Gene ID: HRGMv2_1470_31_151
Type: TC
Location: 194103 - 196448 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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