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Cluster: HRGMv2_1470_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1470_26 HRGMv2_1470_26_13 11188 11670 + 4.A.6.1.3
sulfatase HRGMv2_1470_26 HRGMv2_1470_26_14 11996 13048 - S1_4
TF HRGMv2_1470_26 HRGMv2_1470_26_15 13255 14019 + HTH_DeoR
CAZyme HRGMv2_1470_26 HRGMv2_1470_26_16 14526 15947 - GH1
TC HRGMv2_1470_26 HRGMv2_1470_26_17 16023 17801 - 4.A.3.1.1
TF HRGMv2_1470_26 HRGMv2_1470_26_18 18077 19087 + LacI
CAZyme HRGMv2_1470_26 HRGMv2_1470_26_19 19353 20792 - GH1
TC HRGMv2_1470_26 HRGMv2_1470_26_20 20863 22638 - 4.A.3.1.1
TF HRGMv2_1470_26 HRGMv2_1470_26_21 22995 23999 + LacI
TC HRGMv2_1470_26 HRGMv2_1470_26_22 24214 24552 + 4.A.3.1.2
Gene ID: HRGMv2_1470_26_13
Type: TC
Location: 11188 - 11670 (+)
Gene ID: HRGMv2_1470_26_14
Type: sulfatase
Location: 11996 - 13048 (-)
Gene ID: HRGMv2_1470_26_15
Type: TF
Location: 13255 - 14019 (+)
Gene ID: HRGMv2_1470_26_16
Type: CAZyme
Location: 14526 - 15947 (-)
Gene ID: HRGMv2_1470_26_17
Type: TC
Location: 16023 - 17801 (-)
Gene ID: HRGMv2_1470_26_18
Type: TF
Location: 18077 - 19087 (+)
Gene ID: HRGMv2_1470_26_19
Type: CAZyme
Location: 19353 - 20792 (-)
Gene ID: HRGMv2_1470_26_20
Type: TC
Location: 20863 - 22638 (-)
Gene ID: HRGMv2_1470_26_21
Type: TF
Location: 22995 - 23999 (+)
Gene ID: HRGMv2_1470_26_22
Type: TC
Location: 24214 - 24552 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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