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Cluster: HRGMv2_1470_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1470_25 HRGMv2_1470_25_11 15085 17535 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1470_25 HRGMv2_1470_25_12 17557 17676 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1470_25 HRGMv2_1470_25_13 17760 18479 + GntR
TC HRGMv2_1470_25 HRGMv2_1470_25_14 18786 20102 + 3.A.1.1.45
TC HRGMv2_1470_25 HRGMv2_1470_25_15 20190 21044 + 3.A.1.1.45
TC HRGMv2_1470_25 HRGMv2_1470_25_16 21044 21883 + 3.A.1.1.45
TC HRGMv2_1470_25 HRGMv2_1470_25_17 21952 23151 + 3.A.1.1.22
CAZyme HRGMv2_1470_25 HRGMv2_1470_25_18 23686 25953 - GT35
CAZyme HRGMv2_1470_25 HRGMv2_1470_25_19 26083 27588 - GH77
Gene ID: HRGMv2_1470_25_11
Type: TC
Location: 15085 - 17535 (-)
Gene ID: HRGMv2_1470_25_12
Type:
Location: 17557 - 17676 (+)
Gene ID: HRGMv2_1470_25_13
Type: TF
Location: 17760 - 18479 (+)
Gene ID: HRGMv2_1470_25_14
Type: TC
Location: 18786 - 20102 (+)
Gene ID: HRGMv2_1470_25_15
Type: TC
Location: 20190 - 21044 (+)
Gene ID: HRGMv2_1470_25_16
Type: TC
Location: 21044 - 21883 (+)
Gene ID: HRGMv2_1470_25_17
Type: TC
Location: 21952 - 23151 (+)
Gene ID: HRGMv2_1470_25_18
Type: CAZyme
Location: 23686 - 25953 (-)
Gene ID: HRGMv2_1470_25_19
Type: CAZyme
Location: 26083 - 27588 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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