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Cluster: HRGMv2_1469_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1469_20 HRGMv2_1469_20_17 17387 18271 - CE7
TC HRGMv2_1469_20 HRGMv2_1469_20_18 18445 19272 - 3.A.1.5.27
TC HRGMv2_1469_20 HRGMv2_1469_20_19 19273 21288 - 3.A.1.5.25
TC HRGMv2_1469_20 HRGMv2_1469_20_20 21292 22248 - 3.A.1.5.38
TC HRGMv2_1469_20 HRGMv2_1469_20_21 22406 24019 - 3.A.1.5.27
pfam HRGMv2_1469_20 HRGMv2_1469_20_22 24384 26324 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1469_20 HRGMv2_1469_20_23 26331 28013 - 2.A.66.4.4
Gene ID: HRGMv2_1469_20_17
Type: CAZyme
Location: 17387 - 18271 (-)
Gene ID: HRGMv2_1469_20_18
Type: TC
Location: 18445 - 19272 (-)
Gene ID: HRGMv2_1469_20_19
Type: TC
Location: 19273 - 21288 (-)
Gene ID: HRGMv2_1469_20_20
Type: TC
Location: 21292 - 22248 (-)
Gene ID: HRGMv2_1469_20_21
Type: TC
Location: 22406 - 24019 (-)
Gene ID: HRGMv2_1469_20_22
Type: pfam
Location: 24384 - 26324 (-)
Gene ID: HRGMv2_1469_20_23
Type: TC
Location: 26331 - 28013 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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