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Cluster: HRGMv2_1469_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1469_1 HRGMv2_1469_1_61 77817 80267 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1469_1 HRGMv2_1469_1_62 80289 80408 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1469_1 HRGMv2_1469_1_63 80492 81211 + GntR
TC HRGMv2_1469_1 HRGMv2_1469_1_64 81518 82834 + 3.A.1.1.45
TC HRGMv2_1469_1 HRGMv2_1469_1_65 82922 83776 + 3.A.1.1.45
TC HRGMv2_1469_1 HRGMv2_1469_1_66 83776 84615 + 3.A.1.1.45
TC HRGMv2_1469_1 HRGMv2_1469_1_67 84684 85883 + 3.A.1.1.22
CAZyme HRGMv2_1469_1 HRGMv2_1469_1_68 86341 88608 - GT35
CAZyme HRGMv2_1469_1 HRGMv2_1469_1_69 88645 90243 - GH77
Gene ID: HRGMv2_1469_1_61
Type: TC
Location: 77817 - 80267 (-)
Gene ID: HRGMv2_1469_1_62
Type:
Location: 80289 - 80408 (+)
Gene ID: HRGMv2_1469_1_63
Type: TF
Location: 80492 - 81211 (+)
Gene ID: HRGMv2_1469_1_64
Type: TC
Location: 81518 - 82834 (+)
Gene ID: HRGMv2_1469_1_65
Type: TC
Location: 82922 - 83776 (+)
Gene ID: HRGMv2_1469_1_66
Type: TC
Location: 83776 - 84615 (+)
Gene ID: HRGMv2_1469_1_67
Type: TC
Location: 84684 - 85883 (+)
Gene ID: HRGMv2_1469_1_68
Type: CAZyme
Location: 86341 - 88608 (-)
Gene ID: HRGMv2_1469_1_69
Type: CAZyme
Location: 88645 - 90243 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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