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Cluster: HRGMv2_1468_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1468_13 HRGMv2_1468_13_10 13582 15264 + 2.A.66.4.4
pfam HRGMv2_1468_13 HRGMv2_1468_13_11 15271 17211 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1468_13 HRGMv2_1468_13_12 17576 19189 + 3.A.1.5.27
TC HRGMv2_1468_13 HRGMv2_1468_13_13 19347 20303 + 3.A.1.5.38
TC HRGMv2_1468_13 HRGMv2_1468_13_14 20307 22322 + 3.A.1.5.25
TC HRGMv2_1468_13 HRGMv2_1468_13_15 22323 23150 + 3.A.1.5.27
CAZyme HRGMv2_1468_13 HRGMv2_1468_13_16 23282 24208 + CE7
Gene ID: HRGMv2_1468_13_10
Type: TC
Location: 13582 - 15264 (+)
Gene ID: HRGMv2_1468_13_11
Type: pfam
Location: 15271 - 17211 (+)
Gene ID: HRGMv2_1468_13_12
Type: TC
Location: 17576 - 19189 (+)
Gene ID: HRGMv2_1468_13_13
Type: TC
Location: 19347 - 20303 (+)
Gene ID: HRGMv2_1468_13_14
Type: TC
Location: 20307 - 22322 (+)
Gene ID: HRGMv2_1468_13_15
Type: TC
Location: 22323 - 23150 (+)
Gene ID: HRGMv2_1468_13_16
Type: CAZyme
Location: 23282 - 24208 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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