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Cluster: HRGMv2_1468_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1468_8 HRGMv2_1468_8_11 14638 17055 - 4.A.1.1.8
TF HRGMv2_1468_8 HRGMv2_1468_8_12 17318 18037 + GntR
TC HRGMv2_1468_8 HRGMv2_1468_8_13 18344 19660 + 3.A.1.1.45
TC HRGMv2_1468_8 HRGMv2_1468_8_14 19749 20603 + 3.A.1.1.45
TC HRGMv2_1468_8 HRGMv2_1468_8_15 20603 21442 + 3.A.1.1.45
TC HRGMv2_1468_8 HRGMv2_1468_8_16 21511 22710 + 3.A.1.1.22
CAZyme HRGMv2_1468_8 HRGMv2_1468_8_17 23166 25433 - GT35
CAZyme HRGMv2_1468_8 HRGMv2_1468_8_18 25563 27068 - GH77
Gene ID: HRGMv2_1468_8_11
Type: TC
Location: 14638 - 17055 (-)
Gene ID: HRGMv2_1468_8_12
Type: TF
Location: 17318 - 18037 (+)
Gene ID: HRGMv2_1468_8_13
Type: TC
Location: 18344 - 19660 (+)
Gene ID: HRGMv2_1468_8_14
Type: TC
Location: 19749 - 20603 (+)
Gene ID: HRGMv2_1468_8_15
Type: TC
Location: 20603 - 21442 (+)
Gene ID: HRGMv2_1468_8_16
Type: TC
Location: 21511 - 22710 (+)
Gene ID: HRGMv2_1468_8_17
Type: CAZyme
Location: 23166 - 25433 (-)
Gene ID: HRGMv2_1468_8_18
Type: CAZyme
Location: 25563 - 27068 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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