dbCAN Logo

Cluster: HRGMv2_1468_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1468_23 HRGMv2_1468_23_11 13987 16326 - 3.A.3.5.15
STP HRGMv2_1468_23 HRGMv2_1468_23_12 16657 18741 - Pkinase
STP HRGMv2_1468_23 HRGMv2_1468_23_13 18913 19875 - FHA
TC HRGMv2_1468_23 HRGMv2_1468_23_14 20383 22632 + 1.I.1.1.3
STP HRGMv2_1468_23 HRGMv2_1468_23_15 23254 24015 + Fer4
TC HRGMv2_1468_23 HRGMv2_1468_23_16 24359 24871 + 4.A.1.2.5
pfam HRGMv2_1468_23 HRGMv2_1468_23_17 24878 25744 + PRD | PRD | CAT_RBD
TC HRGMv2_1468_23 HRGMv2_1468_23_18 25844 27460 + 4.A.1.1.3
CAZyme HRGMv2_1468_23 HRGMv2_1468_23_19 27464 28846 + GH4
Gene ID: HRGMv2_1468_23_11
Type: TC
Location: 13987 - 16326 (-)
Gene ID: HRGMv2_1468_23_12
Type: STP
Location: 16657 - 18741 (-)
Gene ID: HRGMv2_1468_23_13
Type: STP
Location: 18913 - 19875 (-)
Gene ID: HRGMv2_1468_23_14
Type: TC
Location: 20383 - 22632 (+)
Gene ID: HRGMv2_1468_23_15
Type: STP
Location: 23254 - 24015 (+)
Gene ID: HRGMv2_1468_23_16
Type: TC
Location: 24359 - 24871 (+)
Gene ID: HRGMv2_1468_23_17
Type: pfam
Location: 24878 - 25744 (+)
Gene ID: HRGMv2_1468_23_18
Type: TC
Location: 25844 - 27460 (+)
Gene ID: HRGMv2_1468_23_19
Type: CAZyme
Location: 27464 - 28846 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List