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Cluster: HRGMv2_1468_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1468_20 HRGMv2_1468_20_70 84567 84905 - 4.A.3.1.2
TF HRGMv2_1468_20 HRGMv2_1468_20_71 85120 86118 - LacI
TC HRGMv2_1468_20 HRGMv2_1468_20_72 86402 88177 + 4.A.3.1.1
CAZyme HRGMv2_1468_20 HRGMv2_1468_20_73 88253 89674 + GH1
TF HRGMv2_1468_20 HRGMv2_1468_20_74 89870 90634 - HTH_DeoR
sulfatase HRGMv2_1468_20 HRGMv2_1468_20_75 90841 91893 + S1_4
TC HRGMv2_1468_20 HRGMv2_1468_20_76 92220 92702 - 4.A.6.1.5
Gene ID: HRGMv2_1468_20_70
Type: TC
Location: 84567 - 84905 (-)
Gene ID: HRGMv2_1468_20_71
Type: TF
Location: 85120 - 86118 (-)
Gene ID: HRGMv2_1468_20_72
Type: TC
Location: 86402 - 88177 (+)
Gene ID: HRGMv2_1468_20_73
Type: CAZyme
Location: 88253 - 89674 (+)
Gene ID: HRGMv2_1468_20_74
Type: TF
Location: 89870 - 90634 (-)
Gene ID: HRGMv2_1468_20_75
Type: sulfatase
Location: 90841 - 91893 (+)
Gene ID: HRGMv2_1468_20_76
Type: TC
Location: 92220 - 92702 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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