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Cluster: HRGMv2_1467_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1467_4 HRGMv2_1467_4_11 14847 16079 - 4.A.1.1.16
TC HRGMv2_1467_4 HRGMv2_1467_4_12 16114 17214 - 4.A.1.1.8
TF HRGMv2_1467_4 HRGMv2_1467_4_13 17424 18143 + GntR
TC HRGMv2_1467_4 HRGMv2_1467_4_14 18450 19766 + 3.A.1.1.45
TC HRGMv2_1467_4 HRGMv2_1467_4_15 19854 20708 + 3.A.1.1.45
TC HRGMv2_1467_4 HRGMv2_1467_4_16 20708 21547 + 3.A.1.1.45
TC HRGMv2_1467_4 HRGMv2_1467_4_17 21616 22815 + 3.A.1.1.22
CAZyme HRGMv2_1467_4 HRGMv2_1467_4_18 23271 25538 - GT35
CAZyme HRGMv2_1467_4 HRGMv2_1467_4_19 25668 27173 - GH77
Gene ID: HRGMv2_1467_4_11
Type: TC
Location: 14847 - 16079 (-)
Gene ID: HRGMv2_1467_4_12
Type: TC
Location: 16114 - 17214 (-)
Gene ID: HRGMv2_1467_4_13
Type: TF
Location: 17424 - 18143 (+)
Gene ID: HRGMv2_1467_4_14
Type: TC
Location: 18450 - 19766 (+)
Gene ID: HRGMv2_1467_4_15
Type: TC
Location: 19854 - 20708 (+)
Gene ID: HRGMv2_1467_4_16
Type: TC
Location: 20708 - 21547 (+)
Gene ID: HRGMv2_1467_4_17
Type: TC
Location: 21616 - 22815 (+)
Gene ID: HRGMv2_1467_4_18
Type: CAZyme
Location: 23271 - 25538 (-)
Gene ID: HRGMv2_1467_4_19
Type: CAZyme
Location: 25668 - 27173 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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