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Cluster: HRGMv2_1467_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1467_2 HRGMv2_1467_2_95 101908 102834 - CE7
TC HRGMv2_1467_2 HRGMv2_1467_2_96 102966 103793 - 3.A.1.5.27
TC HRGMv2_1467_2 HRGMv2_1467_2_97 103794 105809 - 3.A.1.5.25
TC HRGMv2_1467_2 HRGMv2_1467_2_98 105813 106769 - 3.A.1.5.38
TC HRGMv2_1467_2 HRGMv2_1467_2_99 106927 108540 - 3.A.1.5.27
pfam HRGMv2_1467_2 HRGMv2_1467_2_100 108906 110846 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1467_2 HRGMv2_1467_2_101 110853 112535 - 2.A.66.4.4
Gene ID: HRGMv2_1467_2_95
Type: CAZyme
Location: 101908 - 102834 (-)
Gene ID: HRGMv2_1467_2_96
Type: TC
Location: 102966 - 103793 (-)
Gene ID: HRGMv2_1467_2_97
Type: TC
Location: 103794 - 105809 (-)
Gene ID: HRGMv2_1467_2_98
Type: TC
Location: 105813 - 106769 (-)
Gene ID: HRGMv2_1467_2_99
Type: TC
Location: 106927 - 108540 (-)
Gene ID: HRGMv2_1467_2_100
Type: pfam
Location: 108906 - 110846 (-)
Gene ID: HRGMv2_1467_2_101
Type: TC
Location: 110853 - 112535 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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