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Cluster: HRGMv2_1467_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1467_19 HRGMv2_1467_19_10 12082 12831 + 9.B.18.1.2
CAZyme HRGMv2_1467_19 HRGMv2_1467_19_11 12818 13624 + GT26
pfam HRGMv2_1467_19 HRGMv2_1467_19_12 13617 14726 + Epimerase_2
CAZyme HRGMv2_1467_19 HRGMv2_1467_19_13 14723 15832 + GT4
pfam HRGMv2_1467_19 HRGMv2_1467_19_14 15834 16709 + LicD
NULL(UNKNOWN) HRGMv2_1467_19 HRGMv2_1467_19_15 16693 17169 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1467_19 HRGMv2_1467_19_16 17197 18234 + GT2
pfam HRGMv2_1467_19 HRGMv2_1467_19_17 18250 18945 + Hexapep | Hexapep_2
NULL(UNKNOWN) HRGMv2_1467_19 HRGMv2_1467_19_18 19385 20095 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1467_19 HRGMv2_1467_19_19 20098 21099 + GT2
Gene ID: HRGMv2_1467_19_10
Type: TC
Location: 12082 - 12831 (+)
Gene ID: HRGMv2_1467_19_11
Type: CAZyme
Location: 12818 - 13624 (+)
Gene ID: HRGMv2_1467_19_12
Type: pfam
Location: 13617 - 14726 (+)
Gene ID: HRGMv2_1467_19_13
Type: CAZyme
Location: 14723 - 15832 (+)
Gene ID: HRGMv2_1467_19_14
Type: pfam
Location: 15834 - 16709 (+)
Gene ID: HRGMv2_1467_19_15
Type:
Location: 16693 - 17169 (+)
Gene ID: HRGMv2_1467_19_16
Type: CAZyme
Location: 17197 - 18234 (+)
Gene ID: HRGMv2_1467_19_17
Type: pfam
Location: 18250 - 18945 (+)
Gene ID: HRGMv2_1467_19_18
Type:
Location: 19385 - 20095 (+)
Gene ID: HRGMv2_1467_19_19
Type: CAZyme
Location: 20098 - 21099 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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