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Cluster: HRGMv2_1467_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1467_2 HRGMv2_1467_2_76 78307 80040 - GH13_30
STP HRGMv2_1467_2 HRGMv2_1467_2_77 80785 81531 - STAS
STP HRGMv2_1467_2 HRGMv2_1467_2_78 81613 83958 - GAF | SpoIIE
TC HRGMv2_1467_2 HRGMv2_1467_2_79 84701 85729 - 3.A.1.5.36
TC HRGMv2_1467_2 HRGMv2_1467_2_80 85730 86821 - 3.A.1.5.34
TC HRGMv2_1467_2 HRGMv2_1467_2_81 86824 87759 - 3.A.1.5.11
TC HRGMv2_1467_2 HRGMv2_1467_2_82 87774 88811 - 3.A.1.5.37
TC HRGMv2_1467_2 HRGMv2_1467_2_83 88968 90644 - 3.A.1.5.35
Gene ID: HRGMv2_1467_2_76
Type: CAZyme
Location: 78307 - 80040 (-)
Gene ID: HRGMv2_1467_2_77
Type: STP
Location: 80785 - 81531 (-)
Gene ID: HRGMv2_1467_2_78
Type: STP
Location: 81613 - 83958 (-)
Gene ID: HRGMv2_1467_2_79
Type: TC
Location: 84701 - 85729 (-)
Gene ID: HRGMv2_1467_2_80
Type: TC
Location: 85730 - 86821 (-)
Gene ID: HRGMv2_1467_2_81
Type: TC
Location: 86824 - 87759 (-)
Gene ID: HRGMv2_1467_2_82
Type: TC
Location: 87774 - 88811 (-)
Gene ID: HRGMv2_1467_2_83
Type: TC
Location: 88968 - 90644 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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