dbCAN Logo

Cluster: HRGMv2_1464_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1464_22 HRGMv2_1464_22_13 11418 12923 + GH77
CAZyme HRGMv2_1464_22 HRGMv2_1464_22_14 13052 15319 + GT35
TC HRGMv2_1464_22 HRGMv2_1464_22_15 15775 16974 - 3.A.1.1.22
TC HRGMv2_1464_22 HRGMv2_1464_22_16 17043 17882 - 3.A.1.1.45
TC HRGMv2_1464_22 HRGMv2_1464_22_17 17882 18736 - 3.A.1.1.45
TC HRGMv2_1464_22 HRGMv2_1464_22_18 18824 20140 - 3.A.1.1.45
TF HRGMv2_1464_22 HRGMv2_1464_22_19 20447 21166 - GntR
NULL(UNKNOWN) HRGMv2_1464_22 HRGMv2_1464_22_20 21250 21369 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1464_22 HRGMv2_1464_22_21 21391 23841 + 4.A.1.1.8
Gene ID: HRGMv2_1464_22_13
Type: CAZyme
Location: 11418 - 12923 (+)
Gene ID: HRGMv2_1464_22_14
Type: CAZyme
Location: 13052 - 15319 (+)
Gene ID: HRGMv2_1464_22_15
Type: TC
Location: 15775 - 16974 (-)
Gene ID: HRGMv2_1464_22_16
Type: TC
Location: 17043 - 17882 (-)
Gene ID: HRGMv2_1464_22_17
Type: TC
Location: 17882 - 18736 (-)
Gene ID: HRGMv2_1464_22_18
Type: TC
Location: 18824 - 20140 (-)
Gene ID: HRGMv2_1464_22_19
Type: TF
Location: 20447 - 21166 (-)
Gene ID: HRGMv2_1464_22_20
Type:
Location: 21250 - 21369 (-)
Gene ID: HRGMv2_1464_22_21
Type: TC
Location: 21391 - 23841 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List