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Cluster: HRGMv2_1464_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1464_21 HRGMv2_1464_21_35 31166 32587 - GH1
TC HRGMv2_1464_21 HRGMv2_1464_21_36 32663 34441 - 4.A.3.1.1
TF HRGMv2_1464_21 HRGMv2_1464_21_37 34726 35727 + LacI
CAZyme HRGMv2_1464_21 HRGMv2_1464_21_38 36087 37526 - GH1
TC HRGMv2_1464_21 HRGMv2_1464_21_39 37593 39368 - 4.A.3.1.1
TF HRGMv2_1464_21 HRGMv2_1464_21_40 39726 40730 + LacI
TC HRGMv2_1464_21 HRGMv2_1464_21_41 40945 41283 + 4.A.3.1.2
Gene ID: HRGMv2_1464_21_35
Type: CAZyme
Location: 31166 - 32587 (-)
Gene ID: HRGMv2_1464_21_36
Type: TC
Location: 32663 - 34441 (-)
Gene ID: HRGMv2_1464_21_37
Type: TF
Location: 34726 - 35727 (+)
Gene ID: HRGMv2_1464_21_38
Type: CAZyme
Location: 36087 - 37526 (-)
Gene ID: HRGMv2_1464_21_39
Type: TC
Location: 37593 - 39368 (-)
Gene ID: HRGMv2_1464_21_40
Type: TF
Location: 39726 - 40730 (+)
Gene ID: HRGMv2_1464_21_41
Type: TC
Location: 40945 - 41283 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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