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Cluster: HRGMv2_1464_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1464_21 HRGMv2_1464_21_17 16880 17323 + 4.A.6.1.16
pfam HRGMv2_1464_21 HRGMv2_1464_21_18 17323 17604 + YajC
TC HRGMv2_1464_21 HRGMv2_1464_21_19 17641 18123 + 4.A.6.1.4
TC HRGMv2_1464_21 HRGMv2_1464_21_20 18214 19014 + 4.A.6.1.4
TC HRGMv2_1464_21 HRGMv2_1464_21_21 19004 20086 + 4.A.6.1.4
TF HRGMv2_1464_21 HRGMv2_1464_21_22 20271 21002 + GntR
STP HRGMv2_1464_21 HRGMv2_1464_21_23 21117 22283 + SIS | SIS
CAZyme HRGMv2_1464_21 HRGMv2_1464_21_24 22401 23570 + CE9
Gene ID: HRGMv2_1464_21_17
Type: TC
Location: 16880 - 17323 (+)
Gene ID: HRGMv2_1464_21_18
Type: pfam
Location: 17323 - 17604 (+)
Gene ID: HRGMv2_1464_21_19
Type: TC
Location: 17641 - 18123 (+)
Gene ID: HRGMv2_1464_21_20
Type: TC
Location: 18214 - 19014 (+)
Gene ID: HRGMv2_1464_21_21
Type: TC
Location: 19004 - 20086 (+)
Gene ID: HRGMv2_1464_21_22
Type: TF
Location: 20271 - 21002 (+)
Gene ID: HRGMv2_1464_21_23
Type: STP
Location: 21117 - 22283 (+)
Gene ID: HRGMv2_1464_21_24
Type: CAZyme
Location: 22401 - 23570 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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