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Cluster: HRGMv2_1463_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1463_33 HRGMv2_1463_33_2 1972 3393 + 4.A.1.2.11
CAZyme HRGMv2_1463_33 HRGMv2_1463_33_3 3620 4933 + GH140
TF HRGMv2_1463_33 HRGMv2_1463_33_4 5084 5938 - HTH_6
CAZyme HRGMv2_1463_33 HRGMv2_1463_33_5 6035 8650 - GH106
TF HRGMv2_1463_33 HRGMv2_1463_33_6 8775 9776 + HTH_AraC
CAZyme HRGMv2_1463_33 HRGMv2_1463_33_7 10025 11464 + GH1
TC HRGMv2_1463_33 HRGMv2_1463_33_8 11605 12141 + 4.A.1.2.6
Gene ID: HRGMv2_1463_33_2
Type: TC
Location: 1972 - 3393 (+)
Gene ID: HRGMv2_1463_33_3
Type: CAZyme
Location: 3620 - 4933 (+)
Gene ID: HRGMv2_1463_33_4
Type: TF
Location: 5084 - 5938 (-)
Gene ID: HRGMv2_1463_33_5
Type: CAZyme
Location: 6035 - 8650 (-)
Gene ID: HRGMv2_1463_33_6
Type: TF
Location: 8775 - 9776 (+)
Gene ID: HRGMv2_1463_33_7
Type: CAZyme
Location: 10025 - 11464 (+)
Gene ID: HRGMv2_1463_33_8
Type: TC
Location: 11605 - 12141 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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