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Cluster: HRGMv2_1463_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1463_22 HRGMv2_1463_22_20 21346 22230 - CE7
TC HRGMv2_1463_22 HRGMv2_1463_22_21 22404 23231 - 3.A.1.5.27
TC HRGMv2_1463_22 HRGMv2_1463_22_22 23232 25247 - 3.A.1.5.25
TC HRGMv2_1463_22 HRGMv2_1463_22_23 25251 26207 - 3.A.1.5.38
TC HRGMv2_1463_22 HRGMv2_1463_22_24 26365 27978 - 3.A.1.5.27
pfam HRGMv2_1463_22 HRGMv2_1463_22_25 28344 30284 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1463_22 HRGMv2_1463_22_26 30291 31973 - 2.A.66.4.4
Gene ID: HRGMv2_1463_22_20
Type: CAZyme
Location: 21346 - 22230 (-)
Gene ID: HRGMv2_1463_22_21
Type: TC
Location: 22404 - 23231 (-)
Gene ID: HRGMv2_1463_22_22
Type: TC
Location: 23232 - 25247 (-)
Gene ID: HRGMv2_1463_22_23
Type: TC
Location: 25251 - 26207 (-)
Gene ID: HRGMv2_1463_22_24
Type: TC
Location: 26365 - 27978 (-)
Gene ID: HRGMv2_1463_22_25
Type: pfam
Location: 28344 - 30284 (-)
Gene ID: HRGMv2_1463_22_26
Type: TC
Location: 30291 - 31973 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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