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Cluster: HRGMv2_1463_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1463_16 HRGMv2_1463_16_8 8633 10009 - GH13_20
TC HRGMv2_1463_16 HRGMv2_1463_16_9 10089 11285 - 2.A.1.2.18
TC HRGMv2_1463_16 HRGMv2_1463_16_10 11409 13769 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1463_16 HRGMv2_1463_16_11 13891 14211 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1463_16 HRGMv2_1463_16_12 14259 15158 - S09.UPW
TC HRGMv2_1463_16 HRGMv2_1463_16_13 15405 15968 + 4.A.1.2.6
pfam HRGMv2_1463_16 HRGMv2_1463_16_14 16150 17553 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1463_16 HRGMv2_1463_16_15 17803 18588 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1463_16 HRGMv2_1463_16_16 18749 19729 + 3.A.1.34.1
TC HRGMv2_1463_16 HRGMv2_1463_16_17 19919 20842 + 3.A.1.34.1
TC HRGMv2_1463_16 HRGMv2_1463_16_18 20835 21629 + 3.A.1.34.1
Gene ID: HRGMv2_1463_16_8
Type: CAZyme
Location: 8633 - 10009 (-)
Gene ID: HRGMv2_1463_16_9
Type: TC
Location: 10089 - 11285 (-)
Gene ID: HRGMv2_1463_16_10
Type: TC
Location: 11409 - 13769 (-)
Gene ID: HRGMv2_1463_16_11
Type:
Location: 13891 - 14211 (-)
Gene ID: HRGMv2_1463_16_12
Type: peptidase
Location: 14259 - 15158 (-)
Gene ID: HRGMv2_1463_16_13
Type: TC
Location: 15405 - 15968 (+)
Gene ID: HRGMv2_1463_16_14
Type: pfam
Location: 16150 - 17553 (+)
Gene ID: HRGMv2_1463_16_15
Type:
Location: 17803 - 18588 (+)
Gene ID: HRGMv2_1463_16_16
Type: TC
Location: 18749 - 19729 (+)
Gene ID: HRGMv2_1463_16_17
Type: TC
Location: 19919 - 20842 (+)
Gene ID: HRGMv2_1463_16_18
Type: TC
Location: 20835 - 21629 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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