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Cluster: HRGMv2_1462_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1462_12 HRGMv2_1462_12_2 1297 2802 + GH77
CAZyme HRGMv2_1462_12 HRGMv2_1462_12_3 2931 5198 + GT35
TC HRGMv2_1462_12 HRGMv2_1462_12_4 5734 6933 - 3.A.1.1.22
TC HRGMv2_1462_12 HRGMv2_1462_12_5 7002 7841 - 3.A.1.1.45
TC HRGMv2_1462_12 HRGMv2_1462_12_6 7841 8695 - 3.A.1.1.45
TC HRGMv2_1462_12 HRGMv2_1462_12_7 8783 10099 - 3.A.1.1.45
TF HRGMv2_1462_12 HRGMv2_1462_12_8 10406 11125 - GntR
NULL(UNKNOWN) HRGMv2_1462_12 HRGMv2_1462_12_9 11209 11328 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1462_12 HRGMv2_1462_12_10 11350 13800 + 4.A.1.1.8
Gene ID: HRGMv2_1462_12_2
Type: CAZyme
Location: 1297 - 2802 (+)
Gene ID: HRGMv2_1462_12_3
Type: CAZyme
Location: 2931 - 5198 (+)
Gene ID: HRGMv2_1462_12_4
Type: TC
Location: 5734 - 6933 (-)
Gene ID: HRGMv2_1462_12_5
Type: TC
Location: 7002 - 7841 (-)
Gene ID: HRGMv2_1462_12_6
Type: TC
Location: 7841 - 8695 (-)
Gene ID: HRGMv2_1462_12_7
Type: TC
Location: 8783 - 10099 (-)
Gene ID: HRGMv2_1462_12_8
Type: TF
Location: 10406 - 11125 (-)
Gene ID: HRGMv2_1462_12_9
Type:
Location: 11209 - 11328 (-)
Gene ID: HRGMv2_1462_12_10
Type: TC
Location: 11350 - 13800 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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