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Cluster: HRGMv2_1462_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1462_30 HRGMv2_1462_30_90 91540 92466 - CE7
TC HRGMv2_1462_30 HRGMv2_1462_30_91 92598 93425 - 3.A.1.5.27
TC HRGMv2_1462_30 HRGMv2_1462_30_92 93426 95441 - 3.A.1.5.25
TC HRGMv2_1462_30 HRGMv2_1462_30_93 95445 96401 - 3.A.1.5.38
TC HRGMv2_1462_30 HRGMv2_1462_30_94 96559 98172 - 3.A.1.5.27
pfam HRGMv2_1462_30 HRGMv2_1462_30_95 98537 100477 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1462_30 HRGMv2_1462_30_96 100484 102166 - 2.A.66.4.4
Gene ID: HRGMv2_1462_30_90
Type: CAZyme
Location: 91540 - 92466 (-)
Gene ID: HRGMv2_1462_30_91
Type: TC
Location: 92598 - 93425 (-)
Gene ID: HRGMv2_1462_30_92
Type: TC
Location: 93426 - 95441 (-)
Gene ID: HRGMv2_1462_30_93
Type: TC
Location: 95445 - 96401 (-)
Gene ID: HRGMv2_1462_30_94
Type: TC
Location: 96559 - 98172 (-)
Gene ID: HRGMv2_1462_30_95
Type: pfam
Location: 98537 - 100477 (-)
Gene ID: HRGMv2_1462_30_96
Type: TC
Location: 100484 - 102166 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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