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Cluster: HRGMv2_1462_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1462_30 HRGMv2_1462_30_70 67154 68887 - GH13_30
STP HRGMv2_1462_30 HRGMv2_1462_30_71 69474 70220 - STAS
STP HRGMv2_1462_30 HRGMv2_1462_30_72 70302 72647 - GAF | SpoIIE
TC HRGMv2_1462_30 HRGMv2_1462_30_73 73387 74415 - 3.A.1.5.36
TC HRGMv2_1462_30 HRGMv2_1462_30_74 74416 75507 - 3.A.1.5.34
TC HRGMv2_1462_30 HRGMv2_1462_30_75 75510 76445 - 3.A.1.5.11
TC HRGMv2_1462_30 HRGMv2_1462_30_76 76460 77497 - 3.A.1.5.37
TC HRGMv2_1462_30 HRGMv2_1462_30_77 77654 79330 - 3.A.1.5.35
Gene ID: HRGMv2_1462_30_70
Type: CAZyme
Location: 67154 - 68887 (-)
Gene ID: HRGMv2_1462_30_71
Type: STP
Location: 69474 - 70220 (-)
Gene ID: HRGMv2_1462_30_72
Type: STP
Location: 70302 - 72647 (-)
Gene ID: HRGMv2_1462_30_73
Type: TC
Location: 73387 - 74415 (-)
Gene ID: HRGMv2_1462_30_74
Type: TC
Location: 74416 - 75507 (-)
Gene ID: HRGMv2_1462_30_75
Type: TC
Location: 75510 - 76445 (-)
Gene ID: HRGMv2_1462_30_76
Type: TC
Location: 76460 - 77497 (-)
Gene ID: HRGMv2_1462_30_77
Type: TC
Location: 77654 - 79330 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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