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Cluster: HRGMv2_1462_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1462_24 HRGMv2_1462_24_24 35780 37162 - GH4
TC HRGMv2_1462_24 HRGMv2_1462_24_25 37166 38782 - 4.A.1.1.3
pfam HRGMv2_1462_24 HRGMv2_1462_24_26 38882 39748 - PRD | PRD | CAT_RBD
TC HRGMv2_1462_24 HRGMv2_1462_24_27 39755 40267 - 4.A.1.2.2
STP HRGMv2_1462_24 HRGMv2_1462_24_28 40612 41373 - Fer4
TC HRGMv2_1462_24 HRGMv2_1462_24_29 41998 44247 - 1.I.1.1.3
Gene ID: HRGMv2_1462_24_24
Type: CAZyme
Location: 35780 - 37162 (-)
Gene ID: HRGMv2_1462_24_25
Type: TC
Location: 37166 - 38782 (-)
Gene ID: HRGMv2_1462_24_26
Type: pfam
Location: 38882 - 39748 (-)
Gene ID: HRGMv2_1462_24_27
Type: TC
Location: 39755 - 40267 (-)
Gene ID: HRGMv2_1462_24_28
Type: STP
Location: 40612 - 41373 (-)
Gene ID: HRGMv2_1462_24_29
Type: TC
Location: 41998 - 44247 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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