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Cluster: HRGMv2_1461_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1461_45 HRGMv2_1461_45_10 12324 13829 + GH77
CAZyme HRGMv2_1461_45 HRGMv2_1461_45_11 13959 16226 + GT35
TC HRGMv2_1461_45 HRGMv2_1461_45_12 16683 17882 - 3.A.1.1.22
TC HRGMv2_1461_45 HRGMv2_1461_45_13 17951 18790 - 3.A.1.1.45
TC HRGMv2_1461_45 HRGMv2_1461_45_14 18790 19644 - 3.A.1.1.45
TC HRGMv2_1461_45 HRGMv2_1461_45_15 19732 21048 - 3.A.1.1.45
TF HRGMv2_1461_45 HRGMv2_1461_45_16 21355 22074 - GntR
TC HRGMv2_1461_45 HRGMv2_1461_45_17 22302 24752 + 4.A.1.1.8
Gene ID: HRGMv2_1461_45_10
Type: CAZyme
Location: 12324 - 13829 (+)
Gene ID: HRGMv2_1461_45_11
Type: CAZyme
Location: 13959 - 16226 (+)
Gene ID: HRGMv2_1461_45_12
Type: TC
Location: 16683 - 17882 (-)
Gene ID: HRGMv2_1461_45_13
Type: TC
Location: 17951 - 18790 (-)
Gene ID: HRGMv2_1461_45_14
Type: TC
Location: 18790 - 19644 (-)
Gene ID: HRGMv2_1461_45_15
Type: TC
Location: 19732 - 21048 (-)
Gene ID: HRGMv2_1461_45_16
Type: TF
Location: 21355 - 22074 (-)
Gene ID: HRGMv2_1461_45_17
Type: TC
Location: 22302 - 24752 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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