dbCAN Logo

Cluster: HRGMv2_1461_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1461_28 HRGMv2_1461_28_77 79605 80531 - CE7
TC HRGMv2_1461_28 HRGMv2_1461_28_78 80663 81490 - 3.A.1.5.27
TC HRGMv2_1461_28 HRGMv2_1461_28_79 81491 83506 - 3.A.1.5.25
TC HRGMv2_1461_28 HRGMv2_1461_28_80 83510 84466 - 3.A.1.5.38
TC HRGMv2_1461_28 HRGMv2_1461_28_81 84624 86237 - 3.A.1.5.27
pfam HRGMv2_1461_28 HRGMv2_1461_28_82 86603 88543 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1461_28 HRGMv2_1461_28_83 88550 90853 - 2.A.66.4.4
Gene ID: HRGMv2_1461_28_77
Type: CAZyme
Location: 79605 - 80531 (-)
Gene ID: HRGMv2_1461_28_78
Type: TC
Location: 80663 - 81490 (-)
Gene ID: HRGMv2_1461_28_79
Type: TC
Location: 81491 - 83506 (-)
Gene ID: HRGMv2_1461_28_80
Type: TC
Location: 83510 - 84466 (-)
Gene ID: HRGMv2_1461_28_81
Type: TC
Location: 84624 - 86237 (-)
Gene ID: HRGMv2_1461_28_82
Type: pfam
Location: 86603 - 88543 (-)
Gene ID: HRGMv2_1461_28_83
Type: TC
Location: 88550 - 90853 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List