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Cluster: HRGMv2_1461_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1461_28 HRGMv2_1461_28_58 55938 57671 - GH13_30
STP HRGMv2_1461_28 HRGMv2_1461_28_59 58416 59162 - STAS
STP HRGMv2_1461_28 HRGMv2_1461_28_60 59244 61589 - GAF | SpoIIE
TC HRGMv2_1461_28 HRGMv2_1461_28_61 62332 63360 - 3.A.1.5.36
TC HRGMv2_1461_28 HRGMv2_1461_28_62 63361 64452 - 3.A.1.5.34
TC HRGMv2_1461_28 HRGMv2_1461_28_63 64455 65390 - 3.A.1.5.11
TC HRGMv2_1461_28 HRGMv2_1461_28_64 65405 66442 - 3.A.1.5.37
TC HRGMv2_1461_28 HRGMv2_1461_28_65 66599 68275 - 3.A.1.5.35
Gene ID: HRGMv2_1461_28_58
Type: CAZyme
Location: 55938 - 57671 (-)
Gene ID: HRGMv2_1461_28_59
Type: STP
Location: 58416 - 59162 (-)
Gene ID: HRGMv2_1461_28_60
Type: STP
Location: 59244 - 61589 (-)
Gene ID: HRGMv2_1461_28_61
Type: TC
Location: 62332 - 63360 (-)
Gene ID: HRGMv2_1461_28_62
Type: TC
Location: 63361 - 64452 (-)
Gene ID: HRGMv2_1461_28_63
Type: TC
Location: 64455 - 65390 (-)
Gene ID: HRGMv2_1461_28_64
Type: TC
Location: 65405 - 66442 (-)
Gene ID: HRGMv2_1461_28_65
Type: TC
Location: 66599 - 68275 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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