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Cluster: HRGMv2_1460_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1460_45 HRGMv2_1460_45_91 101120 103456 - 3.A.3.5.15
STP HRGMv2_1460_45 HRGMv2_1460_45_92 103786 105870 - Pkinase
STP HRGMv2_1460_45 HRGMv2_1460_45_93 106042 107004 - FHA
TC HRGMv2_1460_45 HRGMv2_1460_45_94 107512 109782 + 1.I.1.1.3
STP HRGMv2_1460_45 HRGMv2_1460_45_95 110410 111171 + Fer4
TC HRGMv2_1460_45 HRGMv2_1460_45_96 111515 112027 + 4.A.1.2.11
pfam HRGMv2_1460_45 HRGMv2_1460_45_97 112046 112900 + PRD | PRD | CAT_RBD
TC HRGMv2_1460_45 HRGMv2_1460_45_98 113000 114616 + 4.A.1.1.3
CAZyme HRGMv2_1460_45 HRGMv2_1460_45_99 114620 116002 + GH4
Gene ID: HRGMv2_1460_45_91
Type: TC
Location: 101120 - 103456 (-)
Gene ID: HRGMv2_1460_45_92
Type: STP
Location: 103786 - 105870 (-)
Gene ID: HRGMv2_1460_45_93
Type: STP
Location: 106042 - 107004 (-)
Gene ID: HRGMv2_1460_45_94
Type: TC
Location: 107512 - 109782 (+)
Gene ID: HRGMv2_1460_45_95
Type: STP
Location: 110410 - 111171 (+)
Gene ID: HRGMv2_1460_45_96
Type: TC
Location: 111515 - 112027 (+)
Gene ID: HRGMv2_1460_45_97
Type: pfam
Location: 112046 - 112900 (+)
Gene ID: HRGMv2_1460_45_98
Type: TC
Location: 113000 - 114616 (+)
Gene ID: HRGMv2_1460_45_99
Type: CAZyme
Location: 114620 - 116002 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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