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Cluster: HRGMv2_1460_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1460_41 HRGMv2_1460_41_115 123952 124878 - CE7
TC HRGMv2_1460_41 HRGMv2_1460_41_116 125010 125837 - 3.A.1.5.27
TC HRGMv2_1460_41 HRGMv2_1460_41_117 125838 127853 - 3.A.1.5.25
TC HRGMv2_1460_41 HRGMv2_1460_41_118 127857 128813 - 3.A.1.5.38
TC HRGMv2_1460_41 HRGMv2_1460_41_119 128969 130582 - 3.A.1.5.27
pfam HRGMv2_1460_41 HRGMv2_1460_41_120 130948 132888 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1460_41 HRGMv2_1460_41_121 132895 134577 - 2.A.66.4.4
Gene ID: HRGMv2_1460_41_115
Type: CAZyme
Location: 123952 - 124878 (-)
Gene ID: HRGMv2_1460_41_116
Type: TC
Location: 125010 - 125837 (-)
Gene ID: HRGMv2_1460_41_117
Type: TC
Location: 125838 - 127853 (-)
Gene ID: HRGMv2_1460_41_118
Type: TC
Location: 127857 - 128813 (-)
Gene ID: HRGMv2_1460_41_119
Type: TC
Location: 128969 - 130582 (-)
Gene ID: HRGMv2_1460_41_120
Type: pfam
Location: 130948 - 132888 (-)
Gene ID: HRGMv2_1460_41_121
Type: TC
Location: 132895 - 134577 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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