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Cluster: HRGMv2_1460_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1460_41 HRGMv2_1460_41_96 100288 102021 - GH13_30
STP HRGMv2_1460_41 HRGMv2_1460_41_97 102766 103512 - STAS
STP HRGMv2_1460_41 HRGMv2_1460_41_98 103594 105939 - GAF | SpoIIE
TC HRGMv2_1460_41 HRGMv2_1460_41_99 106679 107707 - 3.A.1.5.36
TC HRGMv2_1460_41 HRGMv2_1460_41_100 107708 108799 - 3.A.1.5.34
TC HRGMv2_1460_41 HRGMv2_1460_41_101 108802 109737 - 3.A.1.5.11
TC HRGMv2_1460_41 HRGMv2_1460_41_102 109752 110789 - 3.A.1.5.37
TC HRGMv2_1460_41 HRGMv2_1460_41_103 110946 112622 - 3.A.1.5.35
Gene ID: HRGMv2_1460_41_96
Type: CAZyme
Location: 100288 - 102021 (-)
Gene ID: HRGMv2_1460_41_97
Type: STP
Location: 102766 - 103512 (-)
Gene ID: HRGMv2_1460_41_98
Type: STP
Location: 103594 - 105939 (-)
Gene ID: HRGMv2_1460_41_99
Type: TC
Location: 106679 - 107707 (-)
Gene ID: HRGMv2_1460_41_100
Type: TC
Location: 107708 - 108799 (-)
Gene ID: HRGMv2_1460_41_101
Type: TC
Location: 108802 - 109737 (-)
Gene ID: HRGMv2_1460_41_102
Type: TC
Location: 109752 - 110789 (-)
Gene ID: HRGMv2_1460_41_103
Type: TC
Location: 110946 - 112622 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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