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Cluster: HRGMv2_1460_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1460_39 HRGMv2_1460_39_10 8993 10498 + GH77
CAZyme HRGMv2_1460_39 HRGMv2_1460_39_11 10628 12895 + GT35
TC HRGMv2_1460_39 HRGMv2_1460_39_12 13429 14628 - 3.A.1.1.22
TC HRGMv2_1460_39 HRGMv2_1460_39_13 14697 15536 - 3.A.1.1.45
TC HRGMv2_1460_39 HRGMv2_1460_39_14 15536 16390 - 3.A.1.1.45
TC HRGMv2_1460_39 HRGMv2_1460_39_15 16478 17794 - 3.A.1.1.45
TF HRGMv2_1460_39 HRGMv2_1460_39_16 18101 18820 - GntR
NULL(UNKNOWN) HRGMv2_1460_39 HRGMv2_1460_39_17 18904 19023 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1460_39 HRGMv2_1460_39_18 19045 21495 + 4.A.1.1.8
Gene ID: HRGMv2_1460_39_10
Type: CAZyme
Location: 8993 - 10498 (+)
Gene ID: HRGMv2_1460_39_11
Type: CAZyme
Location: 10628 - 12895 (+)
Gene ID: HRGMv2_1460_39_12
Type: TC
Location: 13429 - 14628 (-)
Gene ID: HRGMv2_1460_39_13
Type: TC
Location: 14697 - 15536 (-)
Gene ID: HRGMv2_1460_39_14
Type: TC
Location: 15536 - 16390 (-)
Gene ID: HRGMv2_1460_39_15
Type: TC
Location: 16478 - 17794 (-)
Gene ID: HRGMv2_1460_39_16
Type: TF
Location: 18101 - 18820 (-)
Gene ID: HRGMv2_1460_39_17
Type:
Location: 18904 - 19023 (-)
Gene ID: HRGMv2_1460_39_18
Type: TC
Location: 19045 - 21495 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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