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Cluster: HRGMv2_1460_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1460_4 HRGMv2_1460_4_1 377 1735 - 2.A.33.1.1
pfam HRGMv2_1460_4 HRGMv2_1460_4_2 2003 2926 - DHH | DHHA2
STP HRGMv2_1460_4 HRGMv2_1460_4_3 3093 4046 - Glucokinase
TC HRGMv2_1460_4 HRGMv2_1460_4_4 4288 4620 - 4.A.3.2.3
TC HRGMv2_1460_4 HRGMv2_1460_4_5 4630 4932 - 4.A.3.2.9
TC HRGMv2_1460_4 HRGMv2_1460_4_6 5086 6438 - 4.A.3.2.9
CAZyme HRGMv2_1460_4 HRGMv2_1460_4_7 6559 7959 - GH1
Gene ID: HRGMv2_1460_4_1
Type: TC
Location: 377 - 1735 (-)
Gene ID: HRGMv2_1460_4_2
Type: pfam
Location: 2003 - 2926 (-)
Gene ID: HRGMv2_1460_4_3
Type: STP
Location: 3093 - 4046 (-)
Gene ID: HRGMv2_1460_4_4
Type: TC
Location: 4288 - 4620 (-)
Gene ID: HRGMv2_1460_4_5
Type: TC
Location: 4630 - 4932 (-)
Gene ID: HRGMv2_1460_4_6
Type: TC
Location: 5086 - 6438 (-)
Gene ID: HRGMv2_1460_4_7
Type: CAZyme
Location: 6559 - 7959 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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