dbCAN Logo

Cluster: HRGMv2_1458_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1458_8 HRGMv2_1458_8_19 21545 22471 - CE7
TC HRGMv2_1458_8 HRGMv2_1458_8_20 22603 23430 - 3.A.1.5.27
TC HRGMv2_1458_8 HRGMv2_1458_8_21 23431 25446 - 3.A.1.5.25
TC HRGMv2_1458_8 HRGMv2_1458_8_22 25450 26406 - 3.A.1.5.38
TC HRGMv2_1458_8 HRGMv2_1458_8_23 26562 28175 - 3.A.1.5.27
pfam HRGMv2_1458_8 HRGMv2_1458_8_24 28541 30481 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1458_8 HRGMv2_1458_8_25 30488 32170 - 2.A.66.4.4
Gene ID: HRGMv2_1458_8_19
Type: CAZyme
Location: 21545 - 22471 (-)
Gene ID: HRGMv2_1458_8_20
Type: TC
Location: 22603 - 23430 (-)
Gene ID: HRGMv2_1458_8_21
Type: TC
Location: 23431 - 25446 (-)
Gene ID: HRGMv2_1458_8_22
Type: TC
Location: 25450 - 26406 (-)
Gene ID: HRGMv2_1458_8_23
Type: TC
Location: 26562 - 28175 (-)
Gene ID: HRGMv2_1458_8_24
Type: pfam
Location: 28541 - 30481 (-)
Gene ID: HRGMv2_1458_8_25
Type: TC
Location: 30488 - 32170 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List