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Cluster: HRGMv2_1458_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1458_3 HRGMv2_1458_3_41 43333 44709 - GH13_20
TC HRGMv2_1458_3 HRGMv2_1458_3_42 44863 46059 - 2.A.1.2.18
TC HRGMv2_1458_3 HRGMv2_1458_3_43 46181 48541 - 9.A.8.1.6
peptidase HRGMv2_1458_3 HRGMv2_1458_3_44 49015 49914 - S09.UPW
TC HRGMv2_1458_3 HRGMv2_1458_3_45 50158 50721 + 4.A.1.2.6
pfam HRGMv2_1458_3 HRGMv2_1458_3_46 50903 52306 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1458_3 HRGMv2_1458_3_47 52566 53354 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1458_3 HRGMv2_1458_3_48 53515 54495 + 3.A.1.34.1
TC HRGMv2_1458_3 HRGMv2_1458_3_49 54699 55622 + 3.A.1.34.1
TC HRGMv2_1458_3 HRGMv2_1458_3_50 55615 56241 + 3.A.1.34.1
Gene ID: HRGMv2_1458_3_41
Type: CAZyme
Location: 43333 - 44709 (-)
Gene ID: HRGMv2_1458_3_42
Type: TC
Location: 44863 - 46059 (-)
Gene ID: HRGMv2_1458_3_43
Type: TC
Location: 46181 - 48541 (-)
Gene ID: HRGMv2_1458_3_44
Type: peptidase
Location: 49015 - 49914 (-)
Gene ID: HRGMv2_1458_3_45
Type: TC
Location: 50158 - 50721 (+)
Gene ID: HRGMv2_1458_3_46
Type: pfam
Location: 50903 - 52306 (+)
Gene ID: HRGMv2_1458_3_47
Type:
Location: 52566 - 53354 (+)
Gene ID: HRGMv2_1458_3_48
Type: TC
Location: 53515 - 54495 (+)
Gene ID: HRGMv2_1458_3_49
Type: TC
Location: 54699 - 55622 (+)
Gene ID: HRGMv2_1458_3_50
Type: TC
Location: 55615 - 56241 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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