dbCAN Logo

Cluster: HRGMv2_1458_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1458_30 HRGMv2_1458_30_2 594 2099 + GH77
CAZyme HRGMv2_1458_30 HRGMv2_1458_30_3 2228 4495 + GT35
TC HRGMv2_1458_30 HRGMv2_1458_30_4 4952 6151 - 3.A.1.1.22
TC HRGMv2_1458_30 HRGMv2_1458_30_5 6220 7059 - 3.A.1.1.45
TC HRGMv2_1458_30 HRGMv2_1458_30_6 7059 7913 - 3.A.1.1.45
TC HRGMv2_1458_30 HRGMv2_1458_30_7 8001 9317 - 3.A.1.1.45
TF HRGMv2_1458_30 HRGMv2_1458_30_8 9624 10343 - GntR
TC HRGMv2_1458_30 HRGMv2_1458_30_9 10571 13021 + 4.A.1.1.8
Gene ID: HRGMv2_1458_30_2
Type: CAZyme
Location: 594 - 2099 (+)
Gene ID: HRGMv2_1458_30_3
Type: CAZyme
Location: 2228 - 4495 (+)
Gene ID: HRGMv2_1458_30_4
Type: TC
Location: 4952 - 6151 (-)
Gene ID: HRGMv2_1458_30_5
Type: TC
Location: 6220 - 7059 (-)
Gene ID: HRGMv2_1458_30_6
Type: TC
Location: 7059 - 7913 (-)
Gene ID: HRGMv2_1458_30_7
Type: TC
Location: 8001 - 9317 (-)
Gene ID: HRGMv2_1458_30_8
Type: TF
Location: 9624 - 10343 (-)
Gene ID: HRGMv2_1458_30_9
Type: TC
Location: 10571 - 13021 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List