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Cluster: HRGMv2_1457_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1457_2 HRGMv2_1457_2_80 81376 81858 + 4.A.6.1.5
sulfatase HRGMv2_1457_2 HRGMv2_1457_2_81 82185 83237 - S1_4
TF HRGMv2_1457_2 HRGMv2_1457_2_82 83444 84208 + HTH_DeoR
CAZyme HRGMv2_1457_2 HRGMv2_1457_2_83 84405 85826 - GH1
TC HRGMv2_1457_2 HRGMv2_1457_2_84 85902 87680 - 4.A.3.1.1
TF HRGMv2_1457_2 HRGMv2_1457_2_85 87956 88966 + LacI
CAZyme HRGMv2_1457_2 HRGMv2_1457_2_86 89241 90680 - GH1
TC HRGMv2_1457_2 HRGMv2_1457_2_87 90747 92522 - 4.A.3.1.1
TF HRGMv2_1457_2 HRGMv2_1457_2_88 92880 93884 + LacI
TC HRGMv2_1457_2 HRGMv2_1457_2_89 94099 94437 + 4.A.3.1.2
Gene ID: HRGMv2_1457_2_80
Type: TC
Location: 81376 - 81858 (+)
Gene ID: HRGMv2_1457_2_81
Type: sulfatase
Location: 82185 - 83237 (-)
Gene ID: HRGMv2_1457_2_82
Type: TF
Location: 83444 - 84208 (+)
Gene ID: HRGMv2_1457_2_83
Type: CAZyme
Location: 84405 - 85826 (-)
Gene ID: HRGMv2_1457_2_84
Type: TC
Location: 85902 - 87680 (-)
Gene ID: HRGMv2_1457_2_85
Type: TF
Location: 87956 - 88966 (+)
Gene ID: HRGMv2_1457_2_86
Type: CAZyme
Location: 89241 - 90680 (-)
Gene ID: HRGMv2_1457_2_87
Type: TC
Location: 90747 - 92522 (-)
Gene ID: HRGMv2_1457_2_88
Type: TF
Location: 92880 - 93884 (+)
Gene ID: HRGMv2_1457_2_89
Type: TC
Location: 94099 - 94437 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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