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Cluster: HRGMv2_1457_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1457_1 HRGMv2_1457_1_37 45114 46202 - 3.D.1.4.2
pfam HRGMv2_1457_1 HRGMv2_1457_1_38 46208 46921 - Complex1_30kDa
TC HRGMv2_1457_1 HRGMv2_1457_1_39 46921 47550 - 3.D.1.4.2
TC HRGMv2_1457_1 HRGMv2_1457_1_40 47563 50445 - 3.D.1.4.2
TF HRGMv2_1457_1 HRGMv2_1457_1_41 50627 51022 - 0039939
STP HRGMv2_1457_1 HRGMv2_1457_1_42 51472 53502 - Pyr_redox_2
TC HRGMv2_1457_1 HRGMv2_1457_1_43 54535 56097 + 4.A.1.1.16
NULL(UNKNOWN) HRGMv2_1457_1 HRGMv2_1457_1_44 56143 56412 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1457_1 HRGMv2_1457_1_45 56432 57760 + GH4
Gene ID: HRGMv2_1457_1_37
Type: TC
Location: 45114 - 46202 (-)
Gene ID: HRGMv2_1457_1_38
Type: pfam
Location: 46208 - 46921 (-)
Gene ID: HRGMv2_1457_1_39
Type: TC
Location: 46921 - 47550 (-)
Gene ID: HRGMv2_1457_1_40
Type: TC
Location: 47563 - 50445 (-)
Gene ID: HRGMv2_1457_1_41
Type: TF
Location: 50627 - 51022 (-)
Gene ID: HRGMv2_1457_1_42
Type: STP
Location: 51472 - 53502 (-)
Gene ID: HRGMv2_1457_1_43
Type: TC
Location: 54535 - 56097 (+)
Gene ID: HRGMv2_1457_1_44
Type:
Location: 56143 - 56412 (+)
Gene ID: HRGMv2_1457_1_45
Type: CAZyme
Location: 56432 - 57760 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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