dbCAN Logo

Cluster: HRGMv2_1457_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1457_39 HRGMv2_1457_39_3 2457 4907 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1457_39 HRGMv2_1457_39_4 4929 5048 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1457_39 HRGMv2_1457_39_5 5132 5851 + GntR
TC HRGMv2_1457_39 HRGMv2_1457_39_6 6158 7474 + 3.A.1.1.45
TC HRGMv2_1457_39 HRGMv2_1457_39_7 7562 8416 + 3.A.1.1.45
TC HRGMv2_1457_39 HRGMv2_1457_39_8 8416 9255 + 3.A.1.1.45
TC HRGMv2_1457_39 HRGMv2_1457_39_9 9324 10523 + 3.A.1.1.22
CAZyme HRGMv2_1457_39 HRGMv2_1457_39_10 11058 13241 - GT35
Gene ID: HRGMv2_1457_39_3
Type: TC
Location: 2457 - 4907 (-)
Gene ID: HRGMv2_1457_39_4
Type:
Location: 4929 - 5048 (+)
Gene ID: HRGMv2_1457_39_5
Type: TF
Location: 5132 - 5851 (+)
Gene ID: HRGMv2_1457_39_6
Type: TC
Location: 6158 - 7474 (+)
Gene ID: HRGMv2_1457_39_7
Type: TC
Location: 7562 - 8416 (+)
Gene ID: HRGMv2_1457_39_8
Type: TC
Location: 8416 - 9255 (+)
Gene ID: HRGMv2_1457_39_9
Type: TC
Location: 9324 - 10523 (+)
Gene ID: HRGMv2_1457_39_10
Type: CAZyme
Location: 11058 - 13241 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List