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Cluster: HRGMv2_1456_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1456_17 HRGMv2_1456_17_13 14349 14687 - 4.A.3.1.2
TF HRGMv2_1456_17 HRGMv2_1456_17_14 14902 15906 - LacI
NULL(UNKNOWN) HRGMv2_1456_17 HRGMv2_1456_17_15 15921 16445 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1456_17 HRGMv2_1456_17_16 16461 18038 + 4.A.3.1.1
CAZyme HRGMv2_1456_17 HRGMv2_1456_17_17 18105 19544 + GH1
TF HRGMv2_1456_17 HRGMv2_1456_17_18 19889 20899 - LacI
TC HRGMv2_1456_17 HRGMv2_1456_17_19 21174 22952 + 4.A.3.1.1
CAZyme HRGMv2_1456_17 HRGMv2_1456_17_20 23028 24449 + GH1
TF HRGMv2_1456_17 HRGMv2_1456_17_21 24646 25410 - HTH_DeoR
sulfatase HRGMv2_1456_17 HRGMv2_1456_17_22 25617 26669 + S1_4
TC HRGMv2_1456_17 HRGMv2_1456_17_23 26996 27478 - 4.A.6.1.5
Gene ID: HRGMv2_1456_17_13
Type: TC
Location: 14349 - 14687 (-)
Gene ID: HRGMv2_1456_17_14
Type: TF
Location: 14902 - 15906 (-)
Gene ID: HRGMv2_1456_17_15
Type:
Location: 15921 - 16445 (+)
Gene ID: HRGMv2_1456_17_16
Type: TC
Location: 16461 - 18038 (+)
Gene ID: HRGMv2_1456_17_17
Type: CAZyme
Location: 18105 - 19544 (+)
Gene ID: HRGMv2_1456_17_18
Type: TF
Location: 19889 - 20899 (-)
Gene ID: HRGMv2_1456_17_19
Type: TC
Location: 21174 - 22952 (+)
Gene ID: HRGMv2_1456_17_20
Type: CAZyme
Location: 23028 - 24449 (+)
Gene ID: HRGMv2_1456_17_21
Type: TF
Location: 24646 - 25410 (-)
Gene ID: HRGMv2_1456_17_22
Type: sulfatase
Location: 25617 - 26669 (+)
Gene ID: HRGMv2_1456_17_23
Type: TC
Location: 26996 - 27478 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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