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Cluster: HRGMv2_1455_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1455_2 HRGMv2_1455_2_113 116579 117955 - GH13_20
TC HRGMv2_1455_2 HRGMv2_1455_2_114 118108 119304 - 2.A.1.2.18
TC HRGMv2_1455_2 HRGMv2_1455_2_115 119426 121786 - 9.A.8.1.6
peptidase HRGMv2_1455_2 HRGMv2_1455_2_116 122132 123034 - S09.UPW
TC HRGMv2_1455_2 HRGMv2_1455_2_117 123278 123841 + 4.A.1.2.6
pfam HRGMv2_1455_2 HRGMv2_1455_2_118 124022 125425 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1455_2 HRGMv2_1455_2_119 125684 126469 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1455_2 HRGMv2_1455_2_120 126630 127610 + 3.A.1.34.1
TC HRGMv2_1455_2 HRGMv2_1455_2_121 127815 128738 + 3.A.1.34.1
TC HRGMv2_1455_2 HRGMv2_1455_2_122 128731 129525 + 3.A.1.34.1
Gene ID: HRGMv2_1455_2_113
Type: CAZyme
Location: 116579 - 117955 (-)
Gene ID: HRGMv2_1455_2_114
Type: TC
Location: 118108 - 119304 (-)
Gene ID: HRGMv2_1455_2_115
Type: TC
Location: 119426 - 121786 (-)
Gene ID: HRGMv2_1455_2_116
Type: peptidase
Location: 122132 - 123034 (-)
Gene ID: HRGMv2_1455_2_117
Type: TC
Location: 123278 - 123841 (+)
Gene ID: HRGMv2_1455_2_118
Type: pfam
Location: 124022 - 125425 (+)
Gene ID: HRGMv2_1455_2_119
Type:
Location: 125684 - 126469 (+)
Gene ID: HRGMv2_1455_2_120
Type: TC
Location: 126630 - 127610 (+)
Gene ID: HRGMv2_1455_2_121
Type: TC
Location: 127815 - 128738 (+)
Gene ID: HRGMv2_1455_2_122
Type: TC
Location: 128731 - 129525 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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