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Cluster: HRGMv2_1455_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1455_16 HRGMv2_1455_16_13 11426 12931 + GH77
CAZyme HRGMv2_1455_16 HRGMv2_1455_16_14 13061 15328 + GT35
TC HRGMv2_1455_16 HRGMv2_1455_16_15 15784 16983 - 3.A.1.1.22
TC HRGMv2_1455_16 HRGMv2_1455_16_16 17052 17891 - 3.A.1.1.45
TC HRGMv2_1455_16 HRGMv2_1455_16_17 17891 18745 - 3.A.1.1.45
TC HRGMv2_1455_16 HRGMv2_1455_16_18 18833 20149 - 3.A.1.1.45
TF HRGMv2_1455_16 HRGMv2_1455_16_19 20456 21175 - GntR
TC HRGMv2_1455_16 HRGMv2_1455_16_20 21400 23850 + 4.A.1.1.8
Gene ID: HRGMv2_1455_16_13
Type: CAZyme
Location: 11426 - 12931 (+)
Gene ID: HRGMv2_1455_16_14
Type: CAZyme
Location: 13061 - 15328 (+)
Gene ID: HRGMv2_1455_16_15
Type: TC
Location: 15784 - 16983 (-)
Gene ID: HRGMv2_1455_16_16
Type: TC
Location: 17052 - 17891 (-)
Gene ID: HRGMv2_1455_16_17
Type: TC
Location: 17891 - 18745 (-)
Gene ID: HRGMv2_1455_16_18
Type: TC
Location: 18833 - 20149 (-)
Gene ID: HRGMv2_1455_16_19
Type: TF
Location: 20456 - 21175 (-)
Gene ID: HRGMv2_1455_16_20
Type: TC
Location: 21400 - 23850 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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