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Cluster: HRGMv2_1455_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1455_13 HRGMv2_1455_13_44 44814 45740 - CE7
TC HRGMv2_1455_13 HRGMv2_1455_13_45 45872 46699 - 3.A.1.5.27
TC HRGMv2_1455_13 HRGMv2_1455_13_46 46700 48715 - 3.A.1.5.25
TC HRGMv2_1455_13 HRGMv2_1455_13_47 48719 49675 - 3.A.1.5.38
TC HRGMv2_1455_13 HRGMv2_1455_13_48 49833 51446 - 3.A.1.5.27
pfam HRGMv2_1455_13 HRGMv2_1455_13_49 51812 53752 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1455_13 HRGMv2_1455_13_50 53759 55441 - 2.A.66.4.4
Gene ID: HRGMv2_1455_13_44
Type: CAZyme
Location: 44814 - 45740 (-)
Gene ID: HRGMv2_1455_13_45
Type: TC
Location: 45872 - 46699 (-)
Gene ID: HRGMv2_1455_13_46
Type: TC
Location: 46700 - 48715 (-)
Gene ID: HRGMv2_1455_13_47
Type: TC
Location: 48719 - 49675 (-)
Gene ID: HRGMv2_1455_13_48
Type: TC
Location: 49833 - 51446 (-)
Gene ID: HRGMv2_1455_13_49
Type: pfam
Location: 51812 - 53752 (-)
Gene ID: HRGMv2_1455_13_50
Type: TC
Location: 53759 - 55441 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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