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Cluster: HRGMv2_1455_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1455_6 HRGMv2_1455_6_59 79637 81019 - GH4
TC HRGMv2_1455_6 HRGMv2_1455_6_60 81023 82639 - 4.A.1.1.3
pfam HRGMv2_1455_6 HRGMv2_1455_6_61 82739 83605 - PRD | PRD | CAT_RBD
TC HRGMv2_1455_6 HRGMv2_1455_6_62 83612 84124 - 4.A.1.2.5
STP HRGMv2_1455_6 HRGMv2_1455_6_63 84468 85229 - Fer4
TC HRGMv2_1455_6 HRGMv2_1455_6_64 85851 88100 - 1.I.1.1.3
STP HRGMv2_1455_6 HRGMv2_1455_6_65 88608 89570 + FHA
STP HRGMv2_1455_6 HRGMv2_1455_6_66 89742 91826 + Pkinase
TC HRGMv2_1455_6 HRGMv2_1455_6_67 92158 94497 + 3.A.3.5.15
Gene ID: HRGMv2_1455_6_59
Type: CAZyme
Location: 79637 - 81019 (-)
Gene ID: HRGMv2_1455_6_60
Type: TC
Location: 81023 - 82639 (-)
Gene ID: HRGMv2_1455_6_61
Type: pfam
Location: 82739 - 83605 (-)
Gene ID: HRGMv2_1455_6_62
Type: TC
Location: 83612 - 84124 (-)
Gene ID: HRGMv2_1455_6_63
Type: STP
Location: 84468 - 85229 (-)
Gene ID: HRGMv2_1455_6_64
Type: TC
Location: 85851 - 88100 (-)
Gene ID: HRGMv2_1455_6_65
Type: STP
Location: 88608 - 89570 (+)
Gene ID: HRGMv2_1455_6_66
Type: STP
Location: 89742 - 91826 (+)
Gene ID: HRGMv2_1455_6_67
Type: TC
Location: 92158 - 94497 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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