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Cluster: HRGMv2_1454_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1454_21 HRGMv2_1454_21_10 8892 10397 + GH77
CAZyme HRGMv2_1454_21 HRGMv2_1454_21_11 10525 12792 + GT35
TC HRGMv2_1454_21 HRGMv2_1454_21_12 13248 14447 - 3.A.1.1.22
TC HRGMv2_1454_21 HRGMv2_1454_21_13 14516 15355 - 3.A.1.1.45
TC HRGMv2_1454_21 HRGMv2_1454_21_14 15355 16209 - 3.A.1.1.45
TC HRGMv2_1454_21 HRGMv2_1454_21_15 16297 17613 - 3.A.1.1.45
TF HRGMv2_1454_21 HRGMv2_1454_21_16 17920 18639 - GntR
NULL(UNKNOWN) HRGMv2_1454_21 HRGMv2_1454_21_17 18723 18842 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1454_21 HRGMv2_1454_21_18 18864 21314 + 4.A.1.1.8
Gene ID: HRGMv2_1454_21_10
Type: CAZyme
Location: 8892 - 10397 (+)
Gene ID: HRGMv2_1454_21_11
Type: CAZyme
Location: 10525 - 12792 (+)
Gene ID: HRGMv2_1454_21_12
Type: TC
Location: 13248 - 14447 (-)
Gene ID: HRGMv2_1454_21_13
Type: TC
Location: 14516 - 15355 (-)
Gene ID: HRGMv2_1454_21_14
Type: TC
Location: 15355 - 16209 (-)
Gene ID: HRGMv2_1454_21_15
Type: TC
Location: 16297 - 17613 (-)
Gene ID: HRGMv2_1454_21_16
Type: TF
Location: 17920 - 18639 (-)
Gene ID: HRGMv2_1454_21_17
Type:
Location: 18723 - 18842 (-)
Gene ID: HRGMv2_1454_21_18
Type: TC
Location: 18864 - 21314 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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