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Cluster: HRGMv2_1453_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1453_10 HRGMv2_1453_10_28 35567 37243 + 3.A.1.5.35
TC HRGMv2_1453_10 HRGMv2_1453_10_29 37400 38437 + 3.A.1.5.37
TC HRGMv2_1453_10 HRGMv2_1453_10_30 38452 39387 + 3.A.1.5.11
TC HRGMv2_1453_10 HRGMv2_1453_10_31 39390 40481 + 3.A.1.5.34
TC HRGMv2_1453_10 HRGMv2_1453_10_32 40481 41509 + 3.A.1.5.36
STP HRGMv2_1453_10 HRGMv2_1453_10_33 42252 44597 + GAF | SpoIIE
STP HRGMv2_1453_10 HRGMv2_1453_10_34 44676 45422 + STAS
CAZyme HRGMv2_1453_10 HRGMv2_1453_10_35 46011 47744 + GH13_30
Gene ID: HRGMv2_1453_10_28
Type: TC
Location: 35567 - 37243 (+)
Gene ID: HRGMv2_1453_10_29
Type: TC
Location: 37400 - 38437 (+)
Gene ID: HRGMv2_1453_10_30
Type: TC
Location: 38452 - 39387 (+)
Gene ID: HRGMv2_1453_10_31
Type: TC
Location: 39390 - 40481 (+)
Gene ID: HRGMv2_1453_10_32
Type: TC
Location: 40481 - 41509 (+)
Gene ID: HRGMv2_1453_10_33
Type: STP
Location: 42252 - 44597 (+)
Gene ID: HRGMv2_1453_10_34
Type: STP
Location: 44676 - 45422 (+)
Gene ID: HRGMv2_1453_10_35
Type: CAZyme
Location: 46011 - 47744 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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