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Cluster: HRGMv2_1453_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1453_49 HRGMv2_1453_49_7 6153 7574 - GH1
TC HRGMv2_1453_49 HRGMv2_1453_49_8 7650 9428 - 4.A.3.1.1
TF HRGMv2_1453_49 HRGMv2_1453_49_9 9713 10714 + LacI
TC HRGMv2_1453_49 HRGMv2_1453_49_10 11128 12888 - 4.A.3.1.1
CAZyme HRGMv2_1453_49 HRGMv2_1453_49_11 13065 14507 - GH1
TF HRGMv2_1453_49 HRGMv2_1453_49_12 14849 15886 + LacI
CAZyme HRGMv2_1453_49 HRGMv2_1453_49_13 16151 17590 - GH1
TC HRGMv2_1453_49 HRGMv2_1453_49_14 17657 19423 - 4.A.3.1.1
TF HRGMv2_1453_49 HRGMv2_1453_49_15 19781 20785 + LacI
TC HRGMv2_1453_49 HRGMv2_1453_49_16 21000 21338 + 4.A.3.1.2
Gene ID: HRGMv2_1453_49_7
Type: CAZyme
Location: 6153 - 7574 (-)
Gene ID: HRGMv2_1453_49_8
Type: TC
Location: 7650 - 9428 (-)
Gene ID: HRGMv2_1453_49_9
Type: TF
Location: 9713 - 10714 (+)
Gene ID: HRGMv2_1453_49_10
Type: TC
Location: 11128 - 12888 (-)
Gene ID: HRGMv2_1453_49_11
Type: CAZyme
Location: 13065 - 14507 (-)
Gene ID: HRGMv2_1453_49_12
Type: TF
Location: 14849 - 15886 (+)
Gene ID: HRGMv2_1453_49_13
Type: CAZyme
Location: 16151 - 17590 (-)
Gene ID: HRGMv2_1453_49_14
Type: TC
Location: 17657 - 19423 (-)
Gene ID: HRGMv2_1453_49_15
Type: TF
Location: 19781 - 20785 (+)
Gene ID: HRGMv2_1453_49_16
Type: TC
Location: 21000 - 21338 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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