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Cluster: HRGMv2_1453_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1453_40 HRGMv2_1453_40_5 6810 8276 - 2.A.66.2.23
pfam HRGMv2_1453_40 HRGMv2_1453_40_6 8361 9308 - ATPgrasp_TupA
pfam HRGMv2_1453_40 HRGMv2_1453_40_7 9452 10540 - EpsG
CAZyme HRGMv2_1453_40 HRGMv2_1453_40_8 10537 11640 - GT4
pfam HRGMv2_1453_40 HRGMv2_1453_40_9 11637 12584 - C5-epim_C
CAZyme HRGMv2_1453_40 HRGMv2_1453_40_10 12584 13876 - GT4
pfam HRGMv2_1453_40 HRGMv2_1453_40_11 13882 15111 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_1453_40 HRGMv2_1453_40_12 15196 16113 - GT2
TC HRGMv2_1453_40 HRGMv2_1453_40_13 16117 16719 - 9.B.18.1.2
Gene ID: HRGMv2_1453_40_5
Type: TC
Location: 6810 - 8276 (-)
Gene ID: HRGMv2_1453_40_6
Type: pfam
Location: 8361 - 9308 (-)
Gene ID: HRGMv2_1453_40_7
Type: pfam
Location: 9452 - 10540 (-)
Gene ID: HRGMv2_1453_40_8
Type: CAZyme
Location: 10537 - 11640 (-)
Gene ID: HRGMv2_1453_40_9
Type: pfam
Location: 11637 - 12584 (-)
Gene ID: HRGMv2_1453_40_10
Type: CAZyme
Location: 12584 - 13876 (-)
Gene ID: HRGMv2_1453_40_11
Type: pfam
Location: 13882 - 15111 (-)
Gene ID: HRGMv2_1453_40_12
Type: CAZyme
Location: 15196 - 16113 (-)
Gene ID: HRGMv2_1453_40_13
Type: TC
Location: 16117 - 16719 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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